Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.35□□□□□ -0.43
ApoeP08226 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
ApoeP08226 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ApoeP08226 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.35□□□□□ -0.43
ApoeP08226 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ApoeP08226 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.35□□□□□ -0.43
ApoeP08226 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.35□□□□□ -0.43
ApoeP08226 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.35□□□□□ -0.43
ApoeP08226 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ApoeP08226 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.35□□□□□ -0.43
ApoeP08226 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ApoeP08226 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.35□□□□□ -0.43
ApoeP08226 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ApoeP08226 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.34□□□□□ -0.43
ApoeP08226 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.34□□□□□ -0.43
ApoeP08226 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Mir449b-201ENSMUST00000104833 80 ntBASIC12.34□□□□□ -0.43
ApoeP08226 Gm4995-201ENSMUST00000117247 432 ntBASIC12.34□□□□□ -0.43
ApoeP08226 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.34□□□□□ -0.43
ApoeP08226 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ApoeP08226 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.34□□□□□ -0.43
ApoeP08226 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ApoeP08226 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.34□□□□□ -0.43
ApoeP08226 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.34□□□□□ -0.43
ApoeP08226 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.34□□□□□ -0.43
ApoeP08226 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ApoeP08226 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ApoeP08226 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
ApoeP08226 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ApoeP08226 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.33□□□□□ -0.44
ApoeP08226 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ApoeP08226 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ApoeP08226 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms