Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm17040-202ENSMUST00000170597 889 ntBASIC15.71■□□□□ 0.11
Col4a1P02463 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Col4a1P02463 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Col4a1P02463 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col4a1P02463 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a1P02463 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col4a1P02463 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col4a1P02463 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a1P02463 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a1P02463 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a1P02463 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Col4a1P02463 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a1P02463 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a1P02463 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Col4a1P02463 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.71■□□□□ 0.1
Col4a1P02463 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a1P02463 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Col4a1P02463 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Col4a1P02463 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Gm14644-201ENSMUST00000116671 647 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Gm10051-201ENSMUST00000145209 414 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a1P02463 Mir7032-201ENSMUST00000185154 79 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Gm45118-201ENSMUST00000208928 825 ntBASIC15.7■□□□□ 0.1
Col4a1P02463 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a1P02463 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col4a1P02463 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.69■□□□□ 0.1
Col4a1P02463 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col4a1P02463 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Gm19353-201ENSMUST00000184561 445 ntBASIC15.69■□□□□ 0.1
Col4a1P02463 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.69■□□□□ 0.1
Col4a1P02463 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a1P02463 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.68■□□□□ 0.1
Col4a1P02463 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col4a1P02463 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a1P02463 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.68■□□□□ 0.1
Col4a1P02463 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms