Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.15□□□□□ -0.94
Hbb-b1P02088 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hbb-b1P02088 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Hbb-b1P02088 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.14□□□□□ -0.95
Hbb-b1P02088 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm12644-201ENSMUST00000119935 606 ntBASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm37714-201ENSMUST00000194742 342 ntBASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm6089-201ENSMUST00000197666 938 ntBASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gm5364-201ENSMUST00000216789 889 ntBASIC9.14□□□□□ -0.95
Hbb-b1P02088 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Hbb-b1P02088 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Hbb-b1P02088 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.13□□□□□ -0.95
Hbb-b1P02088 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.13□□□□□ -0.95
Hbb-b1P02088 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC9.13□□□□□ -0.95
Hbb-b1P02088 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.13□□□□□ -0.95
Hbb-b1P02088 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.13□□□□□ -0.95
Hbb-b1P02088 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.13□□□□□ -0.95
Hbb-b1P02088 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hbb-b1P02088 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms