Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Per1O35973 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.12□□□□□ -0.15
Per1O35973 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Per1O35973 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Gm15198-201ENSMUST00000117283 177 ntBASIC14.11□□□□□ -0.15
Per1O35973 Gm13297-201ENSMUST00000120205 934 ntBASIC14.11□□□□□ -0.15
Per1O35973 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 Gm13316-201ENSMUST00000140537 691 ntBASIC14.11□□□□□ -0.15
Per1O35973 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Mospd4-201ENSMUST00000180618 576 ntBASIC14.11□□□□□ -0.15
Per1O35973 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.11□□□□□ -0.15
Per1O35973 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.11□□□□□ -0.15
Per1O35973 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.11□□□□□ -0.15
Per1O35973 Gm7046-201ENSMUST00000221351 977 ntBASIC14.11□□□□□ -0.15
Per1O35973 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Per1O35973 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Daam2-202ENSMUST00000224595 1926 ntBASIC14.11□□□□□ -0.15
Per1O35973 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Per1O35973 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Acot6-202ENSMUST00000222921 3622 ntBASIC14.1□□□□□ -0.15
Per1O35973 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Per1O35973 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Gm6023-201ENSMUST00000118217 606 ntBASIC14.1□□□□□ -0.15
Per1O35973 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.1□□□□□ -0.15
Per1O35973 Gm13492-201ENSMUST00000119772 665 ntBASIC14.1□□□□□ -0.15
Per1O35973 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.1□□□□□ -0.15
Per1O35973 Mir8109-201ENSMUST00000184375 117 ntBASIC14.1□□□□□ -0.15
Per1O35973 Gm6007-201ENSMUST00000208170 823 ntBASIC14.1□□□□□ -0.15
Per1O35973 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.1□□□□□ -0.15
Per1O35973 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.1□□□□□ -0.15
Per1O35973 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Per1O35973 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Per1O35973 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Per1O35973 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Per1O35973 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.09□□□□□ -0.15
Per1O35973 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Per1O35973 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms