Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Atf6bO35451 Mir1894-201ENSMUST00000122802 81 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.36□□□□□ -0.59
Atf6bO35451 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6bO35451 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.36□□□□□ -0.59
Atf6bO35451 Gm6244-201ENSMUST00000178732 841 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gm27892-201ENSMUST00000185017 106 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gm7287-201ENSMUST00000205267 602 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gm5035-201ENSMUST00000215581 927 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gm17794-201ENSMUST00000220252 955 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gm18473-201ENSMUST00000220543 868 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.36□□□□□ -0.59
Atf6bO35451 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6bO35451 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.36□□□□□ -0.59
Atf6bO35451 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.36□□□□□ -0.59
Atf6bO35451 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6bO35451 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.35□□□□□ -0.59
Atf6bO35451 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Atf6bO35451 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.35□□□□□ -0.59
Atf6bO35451 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atf6bO35451 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6bO35451 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Atf6bO35451 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Atf6bO35451 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.34□□□□□ -0.59
Atf6bO35451 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Gm6152-201ENSMUST00000151704 340 ntBASIC11.34□□□□□ -0.59
Atf6bO35451 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.34□□□□□ -0.59
Atf6bO35451 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Atf6bO35451 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms