Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Gm45880-201ENSMUST00000213041 853 ntBASIC12.99□□□□□ -0.33
Gm3139J3QK78 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.99□□□□□ -0.33
Gm3139J3QK78 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3139J3QK78 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.98□□□□□ -0.33
Gm3139J3QK78 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Gm22121-201ENSMUST00000175148 54 ntBASIC12.98□□□□□ -0.33
Gm3139J3QK78 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.98□□□□□ -0.33
Gm3139J3QK78 Gm8099-201ENSMUST00000200510 742 ntBASIC12.98□□□□□ -0.33
Gm3139J3QK78 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.98□□□□□ -0.33
Gm3139J3QK78 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3139J3QK78 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Gm22018-201ENSMUST00000104357 131 ntBASIC12.97□□□□□ -0.33
Gm3139J3QK78 Gm11591-201ENSMUST00000120063 702 ntBASIC12.97□□□□□ -0.33
Gm3139J3QK78 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm3139J3QK78 Gm38002-201ENSMUST00000193255 180 ntBASIC12.97□□□□□ -0.33
Gm3139J3QK78 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms