Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Gm12363-201ENSMUST00000122250 668 ntBASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm20708H3BKF4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm11637-201ENSMUST00000120601 592 ntBASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm2231-201ENSMUST00000125661 612 ntBASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm27682-201ENSMUST00000183930 110 ntBASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm20708H3BKF4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm14704-201ENSMUST00000120300 874 ntBASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm12291-201ENSMUST00000121627 311 ntBASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm20708H3BKF4 Gm37042-201ENSMUST00000193816 581 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms