Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syngap1F6SEU4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.66□□□□□ -0.06
Syngap1F6SEU4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Gm9211-201ENSMUST00000182882 975 ntBASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syngap1F6SEU4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm14350-201ENSMUST00000116642 640 ntBASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.65□□□□□ -0.06
Syngap1F6SEU4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.65□□□□□ -0.06
Syngap1F6SEU4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Syngap1F6SEU4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms