Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm2272-201ENSMUST00000194903 582 ntBASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-2D3Z4R4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-2D3Z4R4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Btrc-209ENSMUST00000224478 2194 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx6-2D3Z4R4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms