Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd3B1AR17 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chd3B1AR17 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chd3B1AR17 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd3B1AR17 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.77□□□□□ -0.37
Chd3B1AR17 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Gm15370-201ENSMUST00000117158 253 ntBASIC12.77□□□□□ -0.37
Chd3B1AR17 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.77□□□□□ -0.37
Chd3B1AR17 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Chd3B1AR17 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd3B1AR17 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Gm23363-201ENSMUST00000175024 79 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Gm44364-201ENSMUST00000198368 141 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Gm38241-201ENSMUST00000192641 898 ntBASIC12.76□□□□□ -0.37
Chd3B1AR17 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd3B1AR17 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd3B1AR17 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.75□□□□□ -0.37
Chd3B1AR17 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.75□□□□□ -0.37
Chd3B1AR17 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chd3B1AR17 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.75□□□□□ -0.37
Chd3B1AR17 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.75□□□□□ -0.37
Chd3B1AR17 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd3B1AR17 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms