Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm7003-201ENSMUST00000195089 312 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm44069-201ENSMUST00000204898 506 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Col6a4A2AX52 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11□□□□□ -0.65
Col6a4A2AX52 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11□□□□□ -0.65
Col6a4A2AX52 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11□□□□□ -0.65
Col6a4A2AX52 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Col6a4A2AX52 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col6a4A2AX52 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm24514-201ENSMUST00000174961 285 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11□□□□□ -0.65
Col6a4A2AX52 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm10109-202ENSMUST00000206890 1211 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 AC123665.1-201ENSMUST00000228204 438 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11□□□□□ -0.65
Col6a4A2AX52 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11□□□□□ -0.65
Col6a4A2AX52 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm12208-201ENSMUST00000122004 163 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm17208-201ENSMUST00000168388 535 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col6a4A2AX52 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm8099-201ENSMUST00000200510 742 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Gm8285-201ENSMUST00000208293 759 ntBASIC11□□□□□ -0.65
Col6a4A2AX52 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a4A2AX52 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.99□□□□□ -0.65
Col6a4A2AX52 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms