Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm45925-201ENSMUST00000218882 744 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3aA2ASI5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Gm14208-201ENSMUST00000119645 678 ntBASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3aA2ASI5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Scn3aA2ASI5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm8712-201ENSMUST00000221090 701 ntBASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms