Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.79□□□□□ -0.52
Smim17A0A504 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.79□□□□□ -0.52
Smim17A0A504 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.79□□□□□ -0.52
Smim17A0A504 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.79□□□□□ -0.52
Smim17A0A504 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smim17A0A504 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.78□□□□□ -0.52
Smim17A0A504 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.78□□□□□ -0.52
Smim17A0A504 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smim17A0A504 Gm29310-201ENSMUST00000185468 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21825-201ENSMUST00000185728 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm29109-201ENSMUST00000185895 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21896-201ENSMUST00000186520 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21873-201ENSMUST00000186728 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21794-201ENSMUST00000187056 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21880-201ENSMUST00000187275 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21826-201ENSMUST00000187451 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21198-201ENSMUST00000188393 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21749-201ENSMUST00000189343 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21901-201ENSMUST00000189568 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm29424-201ENSMUST00000189716 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm28599-201ENSMUST00000189838 694 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21867-201ENSMUST00000189917 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm29269-201ENSMUST00000190087 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21722-201ENSMUST00000190153 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm28423-201ENSMUST00000190701 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21899-201ENSMUST00000190745 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21910-201ENSMUST00000191163 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21849-201ENSMUST00000191571 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm28678-201ENSMUST00000191593 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm20910-201ENSMUST00000193268 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm21871-201ENSMUST00000194621 696 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smim17A0A504 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Smim17A0A504 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.78□□□□□ -0.52
Smim17A0A504 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smim17A0A504 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim17A0A504 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim17A0A504 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim17A0A504 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim17A0A504 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smim17A0A504 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smim17A0A504 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smim17A0A504 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.77□□□□□ -0.52
Smim17A0A504 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms