Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm11524-201ENSMUST00000119349 807 ntBASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm15321-201ENSMUST00000121290 288 ntBASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm15376-201ENSMUST00000122258 783 ntBASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Gm19078-201ENSMUST00000206311 727 ntBASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.96□□□□□ -0.65
Trav5-4A0A075B652 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5-4A0A075B652 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm14057-201ENSMUST00000120631 482 ntBASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm26464-201ENSMUST00000157094 305 ntBASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm38144-201ENSMUST00000192790 465 ntBASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm45841-201ENSMUST00000207700 164 ntBASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms