Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Mir5131-201ENSMUST00000175426 93 ntBASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Mir5126-201ENSMUST00000175513 77 ntBASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Gm13884-201ENSMUST00000118103 829 ntBASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav8-1A0A075B641 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms