Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.04□□□□□ -0.8
PdfS4R2K0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.04□□□□□ -0.8
PdfS4R2K0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Gm14767-201ENSMUST00000121559 586 ntBASIC10.04□□□□□ -0.8
PdfS4R2K0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.04□□□□□ -0.8
PdfS4R2K0 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.04□□□□□ -0.8
PdfS4R2K0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
PdfS4R2K0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
PdfS4R2K0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
PdfS4R2K0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.03□□□□□ -0.8
PdfS4R2K0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
PdfS4R2K0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm13453-201ENSMUST00000118708 357 ntBASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm14057-201ENSMUST00000120631 482 ntBASIC10.03□□□□□ -0.8
PdfS4R2K0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.03□□□□□ -0.8
PdfS4R2K0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.03□□□□□ -0.8
PdfS4R2K0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PdfS4R2K0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
PdfS4R2K0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PdfS4R2K0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PdfS4R2K0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms