Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Gm19078-201ENSMUST00000206311 727 ntBASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb3S4R1G7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm15487-201ENSMUST00000122373 465 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm29667-201ENSMUST00000190817 490 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb3S4R1G7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Gm26464-201ENSMUST00000157094 305 ntBASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Gm28760-201ENSMUST00000185995 736 ntBASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms