Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phf1Q9Z1B8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.05□□□□□ -0.48
Phf1Q9Z1B8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phf1Q9Z1B8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Phf1Q9Z1B8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms