Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atp6ap1Q9R1Q9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atp6ap1Q9R1Q9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atp6ap1Q9R1Q9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms