Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf4Q9QZS2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm15460-201ENSMUST00000118147 391 ntBASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm12260-201ENSMUST00000122447 411 ntBASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf4Q9QZS2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Gm24513-201ENSMUST00000174964 138 ntBASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Gm16476-201ENSMUST00000221544 139 ntBASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.18□□□□□ -0.3
Rnf4Q9QZS2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Gm12428-201ENSMUST00000119844 727 ntBASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Gm14822-201ENSMUST00000122247 291 ntBASIC13.17□□□□□ -0.3
Rnf4Q9QZS2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms