Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Snord83b-201ENSMUST00000104546 94 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Gm12363-201ENSMUST00000122250 668 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Gm22121-201ENSMUST00000175148 54 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3aQ9JKX8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm14704-201ENSMUST00000120300 874 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm1335-201ENSMUST00000121653 386 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm43433-201ENSMUST00000196573 481 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm4768-201ENSMUST00000206199 686 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm19163-201ENSMUST00000223313 780 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm10268-201ENSMUST00000085340 555 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3aQ9JKX8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms