Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Gm11439-201ENSMUST00000118598 409 ntBASIC12.88□□□□□ -0.35
OtofQ9ESF1 Gm14109-201ENSMUST00000118814 309 ntBASIC12.88□□□□□ -0.35
OtofQ9ESF1 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.88□□□□□ -0.35
OtofQ9ESF1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Gm3096-201ENSMUST00000185770 364 ntBASIC12.88□□□□□ -0.35
OtofQ9ESF1 Gm38317-201ENSMUST00000195564 343 ntBASIC12.88□□□□□ -0.35
OtofQ9ESF1 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.88□□□□□ -0.35
OtofQ9ESF1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.88□□□□□ -0.35
OtofQ9ESF1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm8018-201ENSMUST00000173536 789 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm27046-201ENSMUST00000182160 463 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm26956-201ENSMUST00000182176 986 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm14130-201ENSMUST00000118417 987 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm31256-201ENSMUST00000194705 506 ntBASIC12.87□□□□□ -0.35
OtofQ9ESF1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
OtofQ9ESF1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.86□□□□□ -0.35
OtofQ9ESF1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
OtofQ9ESF1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.86□□□□□ -0.35
OtofQ9ESF1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms