Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Gm10576-201ENSMUST00000191927 825 ntBASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Gm43703-201ENSMUST00000200523 763 ntBASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp1bQ9EPL6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp1bQ9EPL6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Gm4875-201ENSMUST00000118257 786 ntBASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.5□□□□□ -0.57
Mmp1bQ9EPL6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms