Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap53Q9D439 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap53Q9D439 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm2495-201ENSMUST00000191160 466 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm16372-201ENSMUST00000073088 450 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.37□□□□□ -0.11
Cfap53Q9D439 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap53Q9D439 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Gm5687-201ENSMUST00000118252 640 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 Gm9908-201ENSMUST00000211534 448 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.36□□□□□ -0.11
Cfap53Q9D439 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap53Q9D439 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.35□□□□□ -0.11
Cfap53Q9D439 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cfap53Q9D439 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms