Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Mir8115-201ENSMUST00000184992 119 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.95□□□□□ -0.34
Cdh23Q99PF4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gm12218-201ENSMUST00000117666 399 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gm22144-201ENSMUST00000157402 102 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Gm1848-201ENSMUST00000120711 789 ntBASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh23Q99PF4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm37458-201ENSMUST00000194055 410 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm5340-201ENSMUST00000203733 880 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm44158-201ENSMUST00000203881 505 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms