Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.27□□□□□ -0.44
Nkx6-1Q99MA9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Gm13665-201ENSMUST00000120830 528 ntBASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Gm26361-201ENSMUST00000158868 186 ntBASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Gm5904-201ENSMUST00000210286 865 ntBASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-1Q99MA9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm25214-201ENSMUST00000104573 129 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm25732-201ENSMUST00000175168 60 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm8385-201ENSMUST00000058999 643 ntBASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-1Q99MA9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms