Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cttnbp2nlQ99LJ0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm15693-201ENSMUST00000120470 637 ntBASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Cttnbp2nlQ99LJ0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Chchd1-203ENSMUST00000224633 557 ntBASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cttnbp2nlQ99LJ0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cttnbp2nlQ99LJ0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms