Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.66□□□□□ -0.38
Cstf3Q99LI7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Gm13689-201ENSMUST00000119360 685 ntBASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Gm18307-201ENSMUST00000206864 949 ntBASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cstf3Q99LI7 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.65□□□□□ -0.39
Cstf3Q99LI7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Cstf3Q99LI7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cstf3Q99LI7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms