Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thumpd1Q99J36 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm14767-201ENSMUST00000121559 586 ntBASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm27680-201ENSMUST00000184192 160 ntBASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm27321-201ENSMUST00000185021 205 ntBASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm43703-201ENSMUST00000200523 763 ntBASIC11.65□□□□□ -0.54
Thumpd1Q99J36 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm17795-201ENSMUST00000214505 757 ntBASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thumpd1Q99J36 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Thumpd1Q99J36 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Thumpd1Q99J36 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.65□□□□□ -0.55
Thumpd1Q99J36 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.64□□□□□ -0.55
Thumpd1Q99J36 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms