Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.89□□□□□ -0.19
Pcdha9Q91Y11 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Gm16177-201ENSMUST00000120728 718 ntBASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Gm43818-201ENSMUST00000200605 466 ntBASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Gm6266-201ENSMUST00000203844 806 ntBASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha9Q91Y11 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Gm15824-201ENSMUST00000119516 955 ntBASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Gm26185-201ENSMUST00000157692 266 ntBASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha9Q91Y11 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms