Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb3Q91XZ7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm12428-201ENSMUST00000119844 727 ntBASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm12151-201ENSMUST00000121374 290 ntBASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Prl7a1-203ENSMUST00000224852 1283 ntBASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb3Q91XZ7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm14659-201ENSMUST00000117667 843 ntBASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm27533-201ENSMUST00000183800 152 ntBASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm27680-201ENSMUST00000184192 160 ntBASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm27989-201ENSMUST00000184721 107 ntBASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb3Q91XZ7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms