Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 AY702102-202ENSMUST00000194651 1173 ntBASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga12Q91XY7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhga12Q91XY7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm12742-201ENSMUST00000117326 410 ntBASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Pcdhga12Q91XY7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms