Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm13689-201ENSMUST00000119360 685 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm11814-201ENSMUST00000119515 929 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm6266-201ENSMUST00000203844 806 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm18062-201ENSMUST00000208020 547 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm18055-201ENSMUST00000208254 547 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm25857-201ENSMUST00000082788 129 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.97□□□□□ -0.33
Usb1Q91W78 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.97□□□□□ -0.33
Usb1Q91W78 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usb1Q91W78 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.96□□□□□ -0.33
Usb1Q91W78 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Usb1Q91W78 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.96□□□□□ -0.33
Usb1Q91W78 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Gm38144-201ENSMUST00000192790 465 ntBASIC12.96□□□□□ -0.33
Usb1Q91W78 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Gm45841-201ENSMUST00000207700 164 ntBASIC12.96□□□□□ -0.33
Usb1Q91W78 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.96□□□□□ -0.33
Usb1Q91W78 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Usb1Q91W78 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.96□□□□□ -0.33
Usb1Q91W78 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usb1Q91W78 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usb1Q91W78 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.96□□□□□ -0.34
Usb1Q91W78 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.95□□□□□ -0.34
Usb1Q91W78 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
Usb1Q91W78 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.95□□□□□ -0.34
Usb1Q91W78 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Usb1Q91W78 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usb1Q91W78 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms