Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Mir1894-201ENSMUST00000122802 81 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Gm18905-201ENSMUST00000205454 928 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Gm18307-201ENSMUST00000206864 949 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4aQ8VEJ9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Gm10478-201ENSMUST00000084451 396 ntBASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4aQ8VEJ9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Gm15678-201ENSMUST00000117573 960 ntBASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Gm12390-201ENSMUST00000117897 397 ntBASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Gm15240-201ENSMUST00000118156 720 ntBASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps4aQ8VEJ9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms