Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm10146-201ENSMUST00000072739 309 ntBASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm10268-201ENSMUST00000085340 555 ntBASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.35□□□□□ -0.43
Ndc1Q8VCB1 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Gm45880-201ENSMUST00000213041 853 ntBASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Ndc1Q8VCB1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ndc1Q8VCB1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ndc1Q8VCB1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.33□□□□□ -0.43
Ndc1Q8VCB1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ndc1Q8VCB1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ndc1Q8VCB1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm13123-201ENSMUST00000122173 492 ntBASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ndc1Q8VCB1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms