Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc9Q8VC31 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 AC153506.1-201ENSMUST00000218768 2915 ntBASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Gm1401-201ENSMUST00000122048 772 ntBASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Gm2272-201ENSMUST00000194903 582 ntBASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc9Q8VC31 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Gm43522-201ENSMUST00000196697 1922 ntBASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc9Q8VC31 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms