Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r28Q8R2C9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r28Q8R2C9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Gm25857-201ENSMUST00000082788 129 ntBASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r28Q8R2C9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vmn1r28Q8R2C9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vmn1r28Q8R2C9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vmn1r28Q8R2C9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms