Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf4Q8K4J2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm5566-201ENSMUST00000116118 459 ntBASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm15460-201ENSMUST00000118147 391 ntBASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm9719-201ENSMUST00000162765 543 ntBASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Psmb5-202ENSMUST00000227257 622 ntBASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf4Q8K4J2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms