Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Gm12286-201ENSMUST00000119246 1002 ntBASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap2Q8K389 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdk5rap2Q8K389 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdk5rap2Q8K389 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Gm10051-201ENSMUST00000145209 414 ntBASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap2Q8K389 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Gm17040-202ENSMUST00000170597 889 ntBASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cdk5rap2Q8K389 Gm11331-201ENSMUST00000119764 288 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm22334-201ENSMUST00000158070 133 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 AC153974.2-201ENSMUST00000218577 1025 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm13045-201ENSMUST00000119019 712 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Gm18393-201ENSMUST00000208349 1131 ntBASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap2Q8K389 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap2Q8K389 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms