Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trim68Q8K243 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim68Q8K243 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim68Q8K243 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim68Q8K243 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim68Q8K243 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Trim68Q8K243 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim68Q8K243 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim68Q8K243 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Gm15370-201ENSMUST00000117158 253 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim68Q8K243 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim68Q8K243 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim68Q8K243 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim68Q8K243 Gm18041-201ENSMUST00000218210 618 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 Gm26315-201ENSMUST00000083890 321 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.21□□□□□ -0.13
Trim68Q8K243 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim68Q8K243 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim68Q8K243 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim68Q8K243 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim68Q8K243 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim68Q8K243 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm22323-201ENSMUST00000103832 109 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm26927-201ENSMUST00000182385 965 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm37922-201ENSMUST00000195596 455 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm37497-201ENSMUST00000195830 798 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm6082-201ENSMUST00000215204 454 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.2□□□□□ -0.14
Trim68Q8K243 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim68Q8K243 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim68Q8K243 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim68Q8K243 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim68Q8K243 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim68Q8K243 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms