Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Calcoco1Q8CGU1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Gm16215-201ENSMUST00000161990 637 ntBASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.67□□□□□ -0.22
Calcoco1Q8CGU1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gm5866-201ENSMUST00000177881 973 ntBASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gm29667-201ENSMUST00000190817 490 ntBASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Calcoco1Q8CGU1 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.65□□□□□ -0.22
Calcoco1Q8CGU1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Calcoco1Q8CGU1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms