Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm27533-201ENSMUST00000183800 152 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm44335-201ENSMUST00000196879 141 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm44297-201ENSMUST00000198304 141 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm44346-201ENSMUST00000198851 141 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm46209-201ENSMUST00000217912 553 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.93□□□□□ -0.34
Ccdc28bQ8CEG5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm15240-201ENSMUST00000118156 720 ntBASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm15693-201ENSMUST00000120470 637 ntBASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm27772-201ENSMUST00000184900 187 ntBASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc28bQ8CEG5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Gm27622-201ENSMUST00000183779 60 ntBASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Gm5264-201ENSMUST00000190584 848 ntBASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Gm10253-201ENSMUST00000194270 940 ntBASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Gm19931-201ENSMUST00000198920 368 ntBASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms