Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Gm42433-201ENSMUST00000196806 940 ntBASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Gm43854-201ENSMUST00000200418 394 ntBASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 AC122350.1-201ENSMUST00000228135 533 ntBASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pabpn1Q8CCS6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Mir6407-201ENSMUST00000184510 101 ntBASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 CT573086.4-201ENSMUST00000226729 342 ntBASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pabpn1Q8CCS6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gm11502-201ENSMUST00000120917 1211 ntBASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pabpn1Q8CCS6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pabpn1Q8CCS6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pabpn1Q8CCS6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Pabpn1Q8CCS6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pabpn1Q8CCS6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pabpn1Q8CCS6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pabpn1Q8CCS6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm22920-201ENSMUST00000102175 109 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm23255-201ENSMUST00000102244 110 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm14193-201ENSMUST00000105067 153 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Gm4868-201ENSMUST00000164138 789 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 AC134860.1-201ENSMUST00000224867 660 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Pabpn1Q8CCS6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms