Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm37935-201ENSMUST00000192012 982 ntBASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Gm44344-201ENSMUST00000200287 129 ntBASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lysmd4Q8CC84 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gm14701-201ENSMUST00000117156 348 ntBASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Gm17795-201ENSMUST00000214505 757 ntBASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lysmd4Q8CC84 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Daam2-202ENSMUST00000224595 1926 ntBASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lysmd4Q8CC84 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lysmd4Q8CC84 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms