Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a6Q8C6K9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Gm24749-201ENSMUST00000157838 343 ntBASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a6Q8C6K9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm7003-201ENSMUST00000195089 312 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm43378-201ENSMUST00000199336 582 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm45224-201ENSMUST00000208203 414 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Gm27046-201ENSMUST00000182160 463 ntBASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a6Q8C6K9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Gm6458-201ENSMUST00000211573 635 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a6Q8C6K9 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms