Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.27■□□□□ 0.04
Usp44Q8C2S0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Gm14704-201ENSMUST00000120300 874 ntBASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Gm17208-201ENSMUST00000168388 535 ntBASIC15.27■□□□□ 0.04
Usp44Q8C2S0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp44Q8C2S0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Usp44Q8C2S0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Gm26185-201ENSMUST00000157692 266 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Gm43818-201ENSMUST00000200605 466 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Gm4768-201ENSMUST00000206199 686 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.26■□□□□ 0.03
Usp44Q8C2S0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm4984-201ENSMUST00000115987 360 ntBASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm13829-201ENSMUST00000119600 138 ntBASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm1335-201ENSMUST00000121653 386 ntBASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Usp44Q8C2S0 Gm18187-201ENSMUST00000196476 984 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms