Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Mir7221-201ENSMUST00000184009 72 ntBASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne3Q8BT60 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpne3Q8BT60 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpne3Q8BT60 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm16215-201ENSMUST00000161990 637 ntBASIC12.64□□□□□ -0.39
Cpne3Q8BT60 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm7730-201ENSMUST00000212486 454 ntBASIC12.64□□□□□ -0.39
Cpne3Q8BT60 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne3Q8BT60 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Gm42612-201ENSMUST00000197986 623 ntBASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Gm43170-201ENSMUST00000199827 612 ntBASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Gm42550-201ENSMUST00000201553 960 ntBASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms