Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sfr1Q8BP27 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm8213-201ENSMUST00000118191 441 ntBASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm45841-201ENSMUST00000207700 164 ntBASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.36□□□□□ -0.27
Sfr1Q8BP27 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sfr1Q8BP27 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm8652-201ENSMUST00000181363 964 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm8602-201ENSMUST00000184045 607 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm27839-201ENSMUST00000184242 106 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm18187-201ENSMUST00000196476 984 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm10012-201ENSMUST00000078252 192 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sfr1Q8BP27 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sfr1Q8BP27 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms