Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm14058-201ENSMUST00000116082 735 ntBASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm12165-201ENSMUST00000117047 342 ntBASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm27627-201ENSMUST00000183644 150 ntBASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col16a1Q8BLX7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Rmrp-201ENSMUST00000157463 271 ntBASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Gm43916-201ENSMUST00000205062 967 ntBASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col16a1Q8BLX7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gm8194-201ENSMUST00000159783 859 ntBASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gm8365-201ENSMUST00000197334 648 ntBASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gm43058-201ENSMUST00000197645 625 ntBASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col16a1Q8BLX7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms