Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.93□□□□□ -0.66
Ttc28Q80XJ3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm19459-201ENSMUST00000176240 835 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm11340-201ENSMUST00000119226 412 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm6963-201ENSMUST00000147879 379 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Gm17391-201ENSMUST00000171036 126 ntBASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ttc28Q80XJ3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Gm23949-201ENSMUST00000104027 127 ntBASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ntng1-201ENSMUST00000051253 327 ntBASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Gm25880-201ENSMUST00000104331 132 ntBASIC10.91□□□□□ -0.66
Ttc28Q80XJ3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms